Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6733444 chr2:132244789 G/A TUBA3E chr2:130949316-130956034:- 0.52 5.98 4.26E-9 Box Plot
THCA rs67338964 chr17:18673810 T/C FAM18B2 chr17:15343525-15466945:- 0.39 6.36 4.61E-10 Box Plot
THCA rs67340775 chr6:28304384 A/C BTN3A2 chr6:26365387-26378548:+ -0.82 -11.74 3.97E-28 Box Plot
THCA rs67340775 chr6:28304384 A/C RNF5P1 chr8:38458179-38458718:- 0.7 6.23 9.99E-10 Box Plot
THCA rs67340775 chr6:28304384 A/C ZFP57 chr6:29640169-29648887:- 0.92 8.88 1.34E-17 Box Plot
THCA rs6735337 chr2:101098494 G/T LOC285359 chr3:101431278-101432259:+ 0.31 6.3 6.63E-10 Box Plot
THCA rs6735570 chr2:132272057 C/G CCDC74B chr2:130896860-130902707:- 0.35 7.04 6.87E-12 Box Plot
THCA rs6736559 chr2:132189382 T/C CCDC74B chr2:130896860-130902707:- 0.37 6.56 1.42E-10 Box Plot
THCA rs67381177 chr6:28411941 G/C BTN3A2 chr6:26365387-26378548:+ -0.78 -10.86 1.08E-24 Box Plot
THCA rs67381177 chr6:28411941 G/C RNF5P1 chr8:38458179-38458718:- 0.67 5.92 5.98E-9 Box Plot
THCA rs67381177 chr6:28411941 G/C ZFP57 chr6:29640169-29648887:- 0.92 8.85 1.75E-17 Box Plot
THCA rs6738159 chr2:6500686 A/T BCAS4 chr20:49411431-49499213:+ -0.37 -5.93 5.93E-9 Box Plot
THCA rs6739992 chr2:101187204 C/T LOC285359 chr3:101431278-101432259:+ 0.56 13.38 6.7E-35 Box Plot
THCA rs6741170 chr2:132190854 T/G CCDC74B chr2:130896860-130902707:- 0.36 6.85 2.29E-11 Box Plot
THCA rs6741682 chr2:132271874 T/C CCDC74B chr2:130896860-130902707:- 0.35 7.04 6.87E-12 Box Plot